AMPA receptor Totally Explained

Everything about Ampa Receptor totally explained

The alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid receptor (also known as AMPA receptor, AMPAR, or quisqualate receptor) is a non-NMDA-type ionotropic transmembrane receptor for glutamate that mediates fast synaptic transmission in the central nervous system (CNS). Its name is derived from its ability to be activated by the artificial glutamate analog, AMPA. AMPARs are found in many parts of the brain and are the most commonly found receptor in the nervous system.

Structure and function

AMPARs are composed of four types of subunits, designated as GluR₁, GluR₂, GluR₃, and GluR₄, alternatively called GluRA-D, which combine to form tetramers. Most AMPARs are heterotetrameric, consisting of symmetric 'dimer of dimers' of GluR₂ and either GluR₁, GluR₃ or GluR₄.
   The conformation of the subunit protein in the plasma membrane caused controversy for some time. While the amino acid sequence of the subunit indicated that there were four transmembrane domains (parts of the protein that pass through the plasma membrane), proteins interacting with the subunit indicated that the N-terminus was extracellular while the C-terminus was intracellular. If each of the four transmembrane domains went all the way through the plasma membrane, then the two termini would have to be on the same side of the membrane. Eventually, it was discovered that the second transmembrane domain isn't in fact trans at all, but kinks back on itself within the membrane and returns to the intracellular side (see schematic diagram). When the four subunits of the tetramer come together, this second membranous domain forms the ion-permeable pore of the receptor.
   Each AMPAR has four sites to which a molecule of the agonist (such as glutamate) can bind, one in each subunit. The channel can open when two or more sites are occupied. AMPARs open and close quickly, and are thus responsible for most of the fast excitatory synaptic transmission in the central nervous system.
   The AMPAR's permeability to calcium and other cations, such as sodium and potassium, is governed by the GluR₂ subunit. If an AMPAR lacks a GluR₂ subunit, then it'll be permeable to sodium, potassium and calcium. The presence of a GluR₂ subunit will almost certainly render the channel impermeable to calcium. This is determined by post-transcriptional modification - RNA editing - of the Q/R editing site of the GluR₂ mRNA. Here, editing alters the uncharged amino acid glutamine (Q), to the positively-charged arginine (R) in the receptor's ion channel. The positively-charged amino acid at the critical point makes it energetically unfavourable for calcium to enter the cell through the pore. Almost all of the GluR₂ subunits in CNS are edited to the GluR₂(R) form. This means that the principal ions gated by AMPARs are sodium and potassium. The prevention of calcium entry into the cell on activation of GluR₂-containing AMPARs is proposed to guard against excitotoxicity.
   The subunit composition of the AMPAR is also important for the way this receptor is modulated. If an AMPAR lacks GluR₂ subunits, then it's susceptible to being blocked in a voltage-dependent manner by a class of molecules called polyamines. Thus when the neuron is at a depolarized membrane potential, polyamines will block the AMPAR channel more strongly, preventing the flux of potassium ions through the channel pore. GluR₂-lacking AMPARs are thus said to have an inwardly rectifying I/V curve, which means that they pass less outward current than inward current.
   Alongside RNA editing, alternative splicing allows a range of functional AMPA receptor subunits beyond what is encoded in the genome. In other words, although one gene (GRIA1-4) is encoded for each subunit (GluR_1-4), splicing after transcription from DNA allows some exons to be translated interchangeably, leading to several functionally different subunits from each gene.
   The flip/flop sequence is one such interchangeable exon. A 38-amino acid sequence found prior to (ie towards the C-terminus of) the 4th membranous domain in all four AMPAR subunits, it determines the speed of desensitisation of the receptor and also the speed at which the receptor is resensitised. The flip form is present in prenatal AMPA receptors, and gives a sustained current in response to glutamate activation.

Synaptic Plasticity

AMPA receptors (AMPAR) are both glutamate receptors and cation channels that are integral to plasticity and synaptic transmission at many postsynaptic membranes. One of the most widely and thoroughly investigated forms of plasticity in the nervous system is known as long-term potentiation, or LTP. There are two necessary components of LTP: presynaptic glutamate release, and postsynaptic depolarization. Therefore, LTP can be induced experimentally in a paired electrophysiological recording when a presynaptic cell is stimulated to release glutamate on a postsynaptic cell that's depolarized. The typical LTP induction protocol involves a “tetanus” stimulation, which is a 100Hz stimulation for 1 second. When one applies this protocol to a pair of cells, one will see a sustained increase of the amplitude of the excitatory postsynaptic potential (EPSP) following tetanus. This response is very intriguing because it's thought to be the physiological correlate for learning and memory in the cell. In fact, it was recently shown that following a single paired-avoidance paradigm in mice, LTP could be recorded in some hippocampal synapses in vivo.
The molecular basis for LTP has been extensively studied, and AMPARs have been shown to play an integral role in the process. Both GluR₁ and GluR₂ play an important role in synaptic plasticity. It is now known that the underlying physiological correlate for the increase in EPSP size is a postsynaptic upregulation of AMPARs at the membrane, which is accomplished through the interactions of AMPARs with many cellular proteins.
The simplest explanation for LTP is as follows (see the long-term potentiation article for a much more detailed account). Glutamate binds to postsynaptic AMPARs and another glutamate receptor, the NMDA receptor (NMDAR). Ligand binding causes the AMPARs to open, and Na⁺ flows into the postsynaptic cell, resulting in a depolarization. NMDARs, on the other hand, don't open directly because their pores are occluded at resting membrane potential by Mg²⁺ ions. NMDARs can only open when a depolarization from the AMPAR activation leads to repulsion of the Mg²⁺ cation out into the extracellular space, allowing the pore to pass current. Unlike AMPARs, though, NMDARs are permeable to both Na⁺ and Ca²⁺. The Ca²⁺ that passes into the cell triggers the upregulation of AMPARs to the membrane, which results in a long-lasting increase in EPSP size underlying LTP.

Antagonists

CNQX
NBQX - Selective for AMPA receptor over Kainate receptor
Kynurenic acid - endogenous ligand

Further Information

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